BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G02LP1|AL425747
(628 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1757 1172 0.0
>3x_Contig1757
Length = 24754
Score = 1172 bits (590), Expect = 0.0
Identities = 616/624 (98%), Gaps = 1/624 (0%)
Strand = Plus / Plus
Query: 1 gatccgcatggtcagggccaaatgaacggtcaagctcaagctctagatgcaggctcacat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1345 gatccgcatggtcagggccaaatgaacggtcaagctcaagctc-agatgcaggctcacat 1403
Query: 61 tcaagctcaggcacaggctcaagctcaggctcaagctcaagcgcaggctcaggctcaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 tcaagctcaggcacaggctcaagctcaggctcaagctcaagcgcaggctcaggctcaggc 1463
Query: 121 tcaggctcaggctcaggcccacgctcagatgcaagcccagatgcatttacatgatcagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 tcaggctcaggctcaggcccacgctcagatgcaagcccagatgcatttacatgatcagca 1523
Query: 181 tccactttcacaacagcaacagcatcaacagcagcagcaacagcaacttcagttccataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 tccactttcacaacagcaacagcatcaacagcagcagcaacagcaacttcagttccataa 1583
Query: 241 caatttaatgagccctgtyattggatcaaatggtattggcatgtctgaaatgtcgtctat 300
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1584 caatttaatgagccctgtcattggatcaaatggtattggcatgtctgacatgtcgtctat 1643
Query: 301 gcatctaccatcgcaagagtatttggattattcaactttacaatcggcctcttcagaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 gcatctaccatcgcaagagtatttggattattcaactttacaatcggcctcttcagaatt 1703
Query: 361 tttgtctccaataccagttaacgttatgtctgcagaaccacaagatcatatgtttactgt 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1704 tttgtctccaataccagtcaacgttatgtctgcagaaccacaagatcatatgtctactgt 1763
Query: 421 taacatgattgcgcaatttacagcggaggctaacttgcctctctcgttacagtggggcca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1764 caacatgattgcgcaatttacagcggaggctaacttgcctctctcgttacagtcgggcca 1823
Query: 481 gttgaataatccaagagattttactacggcgccttcaagaacagtttatctaggtaacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 gttgaataatccaagagattttactacggcgccttcaagaacagtttatctaggtaacat 1883
Query: 541 tcctgctaccattacttacaaggcattgttggattacgtgcgtcccggtgtagtggaaga 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1884 tcctgctaccattacttacaaggcattgttggattacgtgcgtaccggtgtagtggaaga 1943
Query: 601 agttaagattttatctgaaaagat 624
||||||||||||||||||||||||
Sbjct: 1944 agttaagattttatctgaaaagat 1967
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4665
Number of Sequences: 1807
Number of extensions: 4665
Number of successful extensions: 508
Number of sequences better than 1.0e-20: 1
length of query: 628
length of database: 10,358,551
effective HSP length: 16
effective length of query: 612
effective length of database: 10,329,639
effective search space: 6321739068
effective search space used: 6321739068
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)